This still happens in Franchise mode, exactly as @MetroSaint617 indicated.
I have Interference penalties at 0, play with hybrid controls, and often still get 2 or 3 interference penalties called directly off the FaceOff for minor contact by centres both trying to skate forward - yet always called on my team and not AI team.
I'm playing at game speed 2 - not sure if that is an issue , but as there are no helpful "Sim / Arcade" basic settings anymore, it's difficult to confirm people are playing with same sliders.
I do know I don't see this issue at all in HUT Moments, Squad Battles or HUT Rush - it's only in Franchise mode.
Someone already posted a YouTube clip - they are not hard to find ... https://www.youtube.com/watch?v=6GGouY2peew