Moving them out and back in doesn't work, as it resets to a previous save. I tested this by deleting my garden, and I came back to it fully grown and ready for harvesting.
I've been having the same issue, but I ran into an odd situation. I'm not sure if this would help or hinder your search.
My sim invited a ghost into his family who recently died on his lot. She agreed to move in, and he invited her into a club to prevent it from vanishing when all its members died. He invited her into another club that she wasn't a member of while alive. The glitch happened, so I moved the family out and came back to the same lot.
My sim was set back to the last save, but the ghost had an odd progression. She had been alive in the old save, and should've been again. Instead, she was a ghost living with her old family. That never happened at any part in my game, because my sim raised her from the tombstone and invited her into his family. She never did live with the other family after she became a ghost.
It intrigued me, so I switched active houses to the one with the ghost. She kept her membership in both clubs, so the game recorded the club information correctly but didn't update the sim. It kept her ghostly state, but didn't update her current living arrangements.