@jrbookman I figured out the issue!
I repaired my game, and checked my CC all one by one (painstakingly tedious I know lol). I found the faulty CC that broke the game, isolated it and then relocated all of my mod files out once more to repair the game again and then made sure not to put that particular CC back in when moving the rest back.
Good luck to anyone else that has this issue in the future too it is almost always your CC!