Mods Appearing on game when Mods folder is empty.

Just updated my game, wanted to renew all my mods, Wonderful Whims and MC Command Center. When I launched the game did what I always do, enable script mods, exit the game etc. When I launch the game again, all the MC Command Center Mods show at start up, but also Whicked Whims, which has never been downloaded, decide to start a game and try it out. When I start a save file, I get a notification for Whicked Whims exception. Decide to delete all my mods and just start from the beginning and download them again. My mod folder is now completelty empty as well as my trash can, but at start up it still shows all the mods that were previously on right after the update. The mods in the game are broken, my sim can't go to the bathroom and MC Command Center doesn't even show up. I'm so lost, I have no idea what to do.