Mods equipped do not count against our inventory. Why should you be storing more as they release more characters?
I'd also be interested in what you consider to be a good mod that is nonetheless at the bottom of your inventory.
You realize that no matter where they set the limit, you will always have to sell as many as you bring in or you will accumulate more over time and eventually reach the cap? Whatever it is, even if they raise it to 1000, your job is to achieve equilibrium between inflow and outflow. That job doesn't change with the mod cap.