I'm having the same issue and came to see if anyone else knew what was going on or if there was a fix. I made her in the creator over 40 hours ago, just met her for the first time in game, and while some of her appearance was correct... a lot of it isn't. She somehow has two separate sets of eyebrows that are different colors and completely different make up and vallaslin.
While I've noticed the same sort of issues with Rook, that can be fixed by reloading or going into the mirror. There doesn't seem to be the same option for the Inquisitor which is pretty upsetting. Hope we get a fix for this. :<