Controller not working/mind of its own on PC

I have a similar problem. I have input delay in game and in the menus, every 3-4 seconds, the item in the center of the screen is selected. For example, when I am doing team management, the player which is in the center of the screen selected. Right at the moment that this happens, the mouse pointer also appears on the top left corner of the screen and blinks once. I have tried moving the mouse, but it doesn't help. The mouse moves to that corner automatically.

I run the game in borderless mode.